STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG08067.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (122 aa)    
Predicted Functional Partners:
SMG08094.1
Hypothetical protein.
  
  
 0.958
SMG08099.1
Type IV pilus assembly protein PilY1.
  
  
 0.948
SMG08090.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
    
 0.889
SMG08055.1
General secretion pathway protein G.
    
 0.873
SMG08121.1
Tfp pilus assembly protein, ATPase PilM.
     
 0.769
SMG08142.1
Tfp pilus assembly protein PilN.
     
 0.768
SMG07949.1
Type IV pilus assembly protein PilB.
    
 0.753
SMG08116.1
Hypothetical protein.
       0.718
SMG08163.1
Hypothetical protein.
       0.710
SMG08171.1
Hypothetical protein.
       0.697
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.