Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG08457.1 | SMG11329.1 | SAMN06275492_10136 | SAMN06275492_101254 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.989 |
SMG08457.1 | SMG14169.1 | SAMN06275492_10136 | SAMN06275492_10264 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 0.995 |
SMG08457.1 | SMG14173.1 | SAMN06275492_10136 | SAMN06275492_10265 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | 0.873 |
SMG08457.1 | SMG15908.1 | SAMN06275492_10136 | SAMN06275492_10377 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.944 |
SMG08457.1 | SMG15925.1 | SAMN06275492_10136 | SAMN06275492_10378 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | [FeFe] hydrogenase, group B1/B3. | 0.425 |
SMG08457.1 | SMG27256.1 | SAMN06275492_10136 | SAMN06275492_11237 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | Formate dehydrogenase major subunit. | 0.906 |
SMG08457.1 | SMG27263.1 | SAMN06275492_10136 | SAMN06275492_11238 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | NADH-quinone oxidoreductase subunit F. | 0.996 |
SMG08457.1 | SMG28430.1 | SAMN06275492_10136 | SAMN06275492_11314 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | 4Fe-4S binding domain-containing protein. | 0.422 |
SMG08457.1 | SMG36274.1 | SAMN06275492_10136 | SAMN06275492_12140 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | Ni,Fe-hydrogenase III small subunit. | 0.944 |
SMG08457.1 | acpP | SAMN06275492_10136 | SAMN06275492_101240 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.973 |
SMG11329.1 | SMG08457.1 | SAMN06275492_101254 | SAMN06275492_10136 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 2-oxoglutarate ferredoxin oxidoreductase subunit delta. | 0.989 |
SMG11329.1 | SMG14169.1 | SAMN06275492_101254 | SAMN06275492_10264 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 0.998 |
SMG11329.1 | SMG14173.1 | SAMN06275492_101254 | SAMN06275492_10265 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | 0.982 |
SMG11329.1 | SMG15908.1 | SAMN06275492_101254 | SAMN06275492_10377 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Thioredoxin-like [2Fe-2S] ferredoxin. | 0.971 |
SMG11329.1 | SMG15925.1 | SAMN06275492_101254 | SAMN06275492_10378 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | [FeFe] hydrogenase, group B1/B3. | 0.682 |
SMG11329.1 | SMG27256.1 | SAMN06275492_101254 | SAMN06275492_11237 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Formate dehydrogenase major subunit. | 0.983 |
SMG11329.1 | SMG27263.1 | SAMN06275492_101254 | SAMN06275492_11238 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NADH-quinone oxidoreductase subunit F. | 0.999 |
SMG11329.1 | SMG28430.1 | SAMN06275492_101254 | SAMN06275492_11314 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 4Fe-4S binding domain-containing protein. | 0.999 |
SMG11329.1 | SMG36274.1 | SAMN06275492_101254 | SAMN06275492_12140 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Ni,Fe-hydrogenase III small subunit. | 0.998 |
SMG11329.1 | acpP | SAMN06275492_101254 | SAMN06275492_101240 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.991 |
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