STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG20952.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
SMG20944.1
Glycine reductase.
 
   
 0.885
SMG20915.1
Glycine reductase.
 
   
 0.851
SMG20835.1
Glycine reductase.
 
     0.828
SMG20926.1
Betaine reductase.
 
   
 0.801
SMG26976.1
Glycine reductase.
 
   
 0.780
SMG26941.1
Betaine reductase.
 
   
 0.779
SMG26969.1
Glycine reductase.
 
   
 0.775
SMG26962.1
Glycine reductase.
 
   
 0.772
SMG20931.1
Betaine reductase.
 
     0.746
SMG26948.1
Betaine reductase.
 
   
 0.726
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.