node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplD | rplI | SAMN06275492_10594 | SAMN06275492_10756 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | 0.994 |
rplD | rplK | SAMN06275492_10594 | SAMN06275492_1196 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.994 |
rplD | rplT | SAMN06275492_10594 | SAMN06275492_1283 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.993 |
rplD | rplU | SAMN06275492_10594 | SAMN06275492_10152 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
rplD | rplV | SAMN06275492_10594 | SAMN06275492_10590 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplD | rplW | SAMN06275492_10594 | SAMN06275492_10593 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplD | rpmA | SAMN06275492_10594 | SAMN06275492_10150 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.993 |
rplD | rpsF | SAMN06275492_10594 | SAMN06275492_10760 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.992 |
rplD | rpsQ | SAMN06275492_10594 | SAMN06275492_10586 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rplD | rpsR | SAMN06275492_10594 | SAMN06275492_10758 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.992 |
rplI | rplD | SAMN06275492_10756 | SAMN06275492_10594 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.994 |
rplI | rplK | SAMN06275492_10756 | SAMN06275492_1196 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.994 |
rplI | rplT | SAMN06275492_10756 | SAMN06275492_1283 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
rplI | rplU | SAMN06275492_10756 | SAMN06275492_10152 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
rplI | rplV | SAMN06275492_10756 | SAMN06275492_10590 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.994 |
rplI | rplW | SAMN06275492_10756 | SAMN06275492_10593 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.994 |
rplI | rpmA | SAMN06275492_10756 | SAMN06275492_10150 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.994 |
rplI | rpsF | SAMN06275492_10756 | SAMN06275492_10760 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.996 |
rplI | rpsQ | SAMN06275492_10756 | SAMN06275492_10586 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.995 |
rplI | rpsR | SAMN06275492_10756 | SAMN06275492_10758 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.998 |