STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG23594.1Methyl-accepting chemotaxis protein. (563 aa)    
Predicted Functional Partners:
SMG35339.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.992
SMG23598.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.972
SMG19720.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.956
SMG23489.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.950
SMG29663.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.950
SMG26558.1
PAS domain S-box-containing protein.
  
 0.948
SMG23606.1
Purine-binding chemotaxis protein CheW.
 
 0.915
SMG35265.1
MCP methyltransferase, CheR-type.
 
 0.907
SMG49377.1
Purine-binding chemotaxis protein CheW.
 
 0.900
SMG10022.1
Chemotaxis protein methyltransferase CheR.
 
 0.888
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.