STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG28430.14Fe-4S binding domain-containing protein. (227 aa)    
Predicted Functional Partners:
SMG11329.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SMG14169.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
0.998
SMG27263.1
NADH-quinone oxidoreductase subunit F.
 
0.998
SMG28517.1
Formate hydrogenlyase subunit 4.
 
 0.996
SMG30528.1
FAD dependent oxidoreductase.
  
 0.996
SMG42780.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.996
SMG28583.1
Membrane-bound hydrogenase subunit mbhJ.
 
 0.992
SMG28521.1
Membrane-bound hydrogenase subunit alpha.
 
 0.991
SMG14137.1
NADH-quinone oxidoreductase subunit E/NADP-reducing hydrogenase subunit HndA.
 
 0.979
SMG27270.1
NADH dehydrogenase subunit E.
 
 0.979
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.