STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG29440.1Hook-length control protein FliK. (516 aa)    
Predicted Functional Partners:
SMG29451.1
Flagellar basal-body rod modification protein FlgD.
  
 
 0.989
SMG29581.1
Flagellar motor switch protein FliN/FliY.
  
  
 0.982
SMG29465.1
Flagellar hook-basal body protein.
  
 
 0.977
SMG29572.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.966
SMG29575.1
Flagellar motor switch protein FliM.
  
  
 0.964
SMG37734.1
Type III secretion system ATPase, FliI/YscN.
  
  
 0.950
SMG37746.1
Flagellar motor switch protein FliG.
  
  
 0.950
SMG37754.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.950
SMG37873.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.949
fliE
Flagellar hook-basal body complex protein FliE.
  
  
 0.949
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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