STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG30885.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (380 aa)    
Predicted Functional Partners:
SMG09224.1
Predicted dehydrogenase.
 
 0.901
SMG16712.1
Hexapeptide repeat of succinyl-transferase.
 0.785
SMG16750.1
UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase.
 
 0.779
SMG28942.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.776
SMG18596.1
UDP-N-acetylglucosamine 4,6-dehydratase.
 
 
 0.744
SMG51784.1
WxcM-like, C-terminal.
 
 
 0.737
SMG16896.1
CBS domain-containing protein.
  
 
 0.727
SMG16795.1
NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family.
 
 
 0.726
SMG51781.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.726
SMG18588.1
Predicted dehydrogenase.
 
 
 0.701
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.