STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG32155.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (322 aa)    
Predicted Functional Partners:
SMG32148.1
Oligopeptide transport system permease protein.
 
 0.998
SMG23414.1
Peptide/nickel transport system permease protein/oligopeptide transport system permease protein.
 
 0.982
SMG32146.1
Oligopeptide transport system permease protein.
 
 0.982
SMG15262.1
Peptide/nickel transport system permease protein.
 
 0.976
SMG22898.1
Nickel transport system permease protein.
 
 0.971
SMG32143.1
Peptide/nickel transport system substrate-binding protein/oligopeptide transport system substrate-binding protein.
 
 0.949
SMG15535.1
ATP-binding cassette, subfamily B.
   
0.936
SMG15544.1
ATP-binding cassette, subfamily B.
   
0.925
SMG32150.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.800
SMG23434.1
Peptide/nickel transport system permease protein.
 
 0.789
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.