STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG36232.1Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. (415 aa)    
Predicted Functional Partners:
SMG16700.1
Synergist-CTERM protein sorting domain-containing protein.
  
 
 0.880
SMG36228.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
  
 0.880
SMG11329.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
   0.871
SMG36223.1
Cell division transport system permease protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.793
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
     0.792
SMG36197.1
Transketolase.
 
     0.787
SMG36136.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.760
SMG36216.1
Cell division transport system ATP-binding protein.
       0.758
SMG36169.1
Hypothetical protein.
       0.757
SMG36178.1
Polysaccharide pyruvyl transferase CsaB.
       0.757
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.