STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG38974.1Precorrin-2/cobalt-factor-2 C20-methyltransferase. (235 aa)    
Predicted Functional Partners:
SMG38952.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
 
 0.999
SMG38903.1
precorrin-6Y C5,15-methyltransferase (decarboxylating)/cobalt-precorrin-6B (C15)-methyltransferase.
 
 
 0.998
SMG38940.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase.
 
 
 0.998
SMG38870.1
precorrin-8X methylmutase.
 
 
 0.997
SMG39062.1
uroporphyrinogen-III synthase; Belongs to the precorrin methyltransferase family.
 
  
 0.991
SMG12493.1
Sirohydrochlorin cobaltochelatase.
 
 
 0.986
cbiD
Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.986
SMG38891.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
 
 0.980
cobQ
Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.966
SMG39000.1
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.927
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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