STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG39918.1Nitroreductase. (172 aa)    
Predicted Functional Partners:
SMG17686.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
 0.937
SMG39062.1
uroporphyrinogen-III synthase; Belongs to the precorrin methyltransferase family.
  
 
 0.810
SMG39891.1
Iron only hydrogenase large subunit, C-terminal domain.
       0.773
SMG39899.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
       0.773
SMG39901.1
DRTGG domain-containing protein.
       0.773
SMG39927.1
DNA polymerase.
       0.752
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.740
SMG39867.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
     
 0.723
SMG39875.1
Hypothetical protein.
       0.718
SMG39883.1
Hypothetical protein.
       0.718
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.