STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG41833.1Signal transduction histidine kinase. (609 aa)    
Predicted Functional Partners:
SMG17704.1
Signal transduction histidine kinase.
 
0.996
SMG26558.1
PAS domain S-box-containing protein.
 
0.996
SMG35356.1
Two-component system, cell cycle response regulator.
 0.996
SMG31501.1
PAS domain S-box-containing protein.
 
0.995
SMG31908.1
Signal transduction histidine kinase.
 
 0.995
SMG23598.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.992
SMG40232.1
PAS domain S-box-containing protein.
 0.992
SMG15473.1
Multi-sensor hybrid histidine kinase.
 
0.991
SMG23589.1
PAS domain S-box-containing protein.
 
0.991
SMG19391.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 0.990
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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