STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG42910.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
SMG17312.1
Flagellar assembly protein T, N-terminal domain.
 
     0.782
SMG42948.1
Tetratricopeptide repeat-containing protein.
     
 0.591
SMG41868.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
  
     0.589
SMG18808.1
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.570
flgI
Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
  
 0.564
SMG42932.1
Hypothetical protein.
       0.511
SMG41861.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
  
     0.489
SMG45754.1
HD domain-containing protein.
  
     0.464
SMG21357.1
Hypothetical protein.
  
     0.462
SMG42297.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.