STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galTUTP-hexose-1-phosphate uridylyltransferase. (488 aa)    
Predicted Functional Partners:
SMG45694.1
Galactokinase; Belongs to the GHMP kinase family.
 
 0.997
SMG47109.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.985
SMG52202.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
    0.796
SMG51795.1
Glucose-1-phosphate thymidylyltransferase.
    
 0.561
SMG52199.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  
 0.451
SMG16551.1
UDP-glucuronate 4-epimerase.
     
 0.444
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
     
 0.444
SMG31887.1
L-threonine 3-dehydrogenase.
     
 0.444
SMG33514.1
UDP-glucose 4-epimerase/UDP-N-acetylglucosamine 4-epimerase.
     
 0.444
SMG39981.1
Nucleoside-diphosphate-sugar epimerase.
     
 0.444
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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