STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG52202.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (272 aa)    
Predicted Functional Partners:
SMG52196.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.999
SMG52199.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.999
SMG52205.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.999
galT
UTP-hexose-1-phosphate uridylyltransferase.
  
    0.796
SMG33039.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.690
SMG30506.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.663
SMG52192.1
Methyl-accepting chemotaxis protein.
    
  0.648
SMG33448.1
Methyl-accepting chemotaxis protein.
     
 0.606
SMG13812.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.603
SMG14014.1
iron(III) transport system ATP-binding protein/putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.593
Your Current Organism:
Dethiosulfovibrio salsuginis
NCBI taxonomy Id: 561720
Other names: D. salsuginis, DSM 21565, Dethiosulfovibrio salsuginis Diaz-Cardenas et al. 2010, Dethiosulfovibrio sp. USBA 82, KCTC 5659, strain USBA 82
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