B8P0C5_POSPM protein (Postia placenta Mad698R)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B8P0C5_POSPM

Predicted protein. (343 aa)

Predicted Functional Partners:

B8PAH0_POSPM

0.994

B8PIG0_POSPM

0.981

B8P0C6_POSPM

0.980

B8P8W4_POSPM

0.977

B8PA97_POSPM

0.971

B8PNM9_POSPM

0.964

B8PAI1_POSPM

0.941

B8P785_POSPM

0.939

B8PBC9_POSPM

0.938

B8PCZ7_POSPM

0.938

Your Current Organism:

Postia placenta Mad698R

NCBI taxonomy Id: 561896
Other names: P. placenta Mad-698-R, Postia placenta Mad-698-R

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8P0C5_POSPM	B8P0C6_POSPM	B8P0C5	B8P0C6	Predicted protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.980
B8P0C5_POSPM	B8P785_POSPM	B8P0C5	B8P785	Predicted protein.	40S ribosomal protein S10.	0.939
B8P0C5_POSPM	B8P8W4_POSPM	B8P0C5	B8P8W4	Predicted protein.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.977
B8P0C5_POSPM	B8PA97_POSPM	B8P0C5	B8PA97	Predicted protein.	Predicted protein.	0.971
B8P0C5_POSPM	B8PAH0_POSPM	B8P0C5	B8PAH0	Predicted protein.	Predicted protein.	0.994
B8P0C5_POSPM	B8PAI1_POSPM	B8P0C5	B8PAI1	Predicted protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.941
B8P0C5_POSPM	B8PBC9_POSPM	B8P0C5	B8PBC9	Predicted protein.	40S ribosomal protein S19.	0.938
B8P0C5_POSPM	B8PCZ7_POSPM	B8P0C5	B8PCZ7	Predicted protein.	40S ribosomal protein S27.	0.938
B8P0C5_POSPM	B8PIG0_POSPM	B8P0C5	B8PIG0	Predicted protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.981
B8P0C5_POSPM	B8PNM9_POSPM	B8P0C5	B8PNM9	Predicted protein.	Predicted protein.	0.964
B8P0C6_POSPM	B8P0C5_POSPM	B8P0C6	B8P0C5	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Predicted protein.	0.980
B8P0C6_POSPM	B8P785_POSPM	B8P0C6	B8P785	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S10.	0.999
B8P0C6_POSPM	B8P8W4_POSPM	B8P0C6	B8P8W4	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
B8P0C6_POSPM	B8PAH0_POSPM	B8P0C6	B8PAH0	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Predicted protein.	0.493
B8P0C6_POSPM	B8PAI1_POSPM	B8P0C6	B8PAI1	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
B8P0C6_POSPM	B8PBC9_POSPM	B8P0C6	B8PBC9	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S19.	0.999
B8P0C6_POSPM	B8PCZ7_POSPM	B8P0C6	B8PCZ7	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S27.	0.999
B8P0C6_POSPM	B8PIG0_POSPM	B8P0C6	B8PIG0	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
B8P785_POSPM	B8P0C5_POSPM	B8P785	B8P0C5	40S ribosomal protein S10.	Predicted protein.	0.939
B8P785_POSPM	B8P0C6_POSPM	B8P785	B8P0C6	40S ribosomal protein S10.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999