STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8P672_POSPMPredicted protein. (509 aa)    
Predicted Functional Partners:
B8NZW2_POSPM
Predicted protein.
   
 0.712
B8PKF4_POSPM
Predicted protein.
   
 0.712
B8PP84_POSPM
Predicted protein.
   
 0.652
B8P9H1_POSPM
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.624
B8PL24_POSPM
Small nuclear ribonucleoprotein Sm D2.
   
 0.606
LSM8
U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.604
B8P362_POSPM
Predicted protein.
   
  0.601
B8PNE2_POSPM
Predicted protein.
   
 
 0.579
B8PID5_POSPM
Predicted protein.
   
 
 0.568
B8P032_POSPM
Predicted protein.
    
  0.558
Your Current Organism:
Postia placenta Mad698R
NCBI taxonomy Id: 561896
Other names: P. placenta Mad-698-R, Postia placenta Mad-698-R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.