Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KJG14318.1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
KJG14384.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
KJG14319.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
KJG12189.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.961
KJG13238.1
Histidine kinase; Part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.943
KJG13268.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.873
cpxA
Two-component sensor protein; Part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.864
KJG13858.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.844
KJG14682.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.820
KJG12522.1
Phosphate regulon sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.767
KJG14858.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.726
Your Current Organism:
Photobacterium iliopiscarium
NCBI taxonomy Id: 56192
Other names: ATCC 51760, CAIM 909, CIP 104755, DSM 9896, LMG 19543, LMG:19543, P. iliopiscarium, Vibrio iliopiscarius, strain PS1
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