STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaHBis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (272 aa)    
Predicted Functional Partners:
KJG13812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.992
KJG14107.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.985
KJG13730.1
Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.965
KJG14959.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.943
bioH
pimelyl-ACP methyl ester esterase; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.
    
  0.943
menH
acyl-CoA thioester hydrolase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).
    
  0.943
KJG12622.1
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.943
KJG12639.1
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.943
apaG
Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.924
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
    
 0.917
Your Current Organism:
Photobacterium iliopiscarium
NCBI taxonomy Id: 56192
Other names: ATCC 51760, CAIM 909, CIP 104755, DSM 9896, LMG 19543, LMG:19543, P. iliopiscarium, Vibrio iliopiscarius, strain PS1
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