Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
KKW93566.1Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
KKW92686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.774
KKW91040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.774
KKW91697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.772
KKW92809.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.760
KKW90735.1
Xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.760
KKW89514.1
Xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.752
KKW93344.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
KKW93038.1
Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
KKW89480.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
KKW92074.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.641
Your Current Organism:
Sphingobium chungbukense
NCBI taxonomy Id: 56193
Other names: IMSNU 11152, JCM 11454, KCTC 2955, Pseudomonas sp. DJ77, S. chungbukense, Sphingobium chungbukense (Kim et al. 2000) Pal et al. 2005, Sphingomonas chungbukensis, Sphingomonas chungbukensis Kim et al. 2000, Sphingomonas sp. DJ77, strain DJ77
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