STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW94146.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
KKW94147.1
Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
KKW93571.1
Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.816
KKW94128.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.738
KKW93756.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
KKW91236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
KKW93570.1
Adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.709
KKW93506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
KKW91336.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
KKW89390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
Your Current Organism:
Sphingobium chungbukense
NCBI taxonomy Id: 56193
Other names: IMSNU 11152, JCM 11454, KCTC 2955, Pseudomonas sp. DJ77, S. chungbukense, Sphingobium chungbukense (Kim et al. 2000) Pal et al. 2005, Sphingomonas chungbukensis, Sphingomonas chungbukensis Kim et al. 2000, Sphingomonas sp. DJ77, strain DJ77
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.