Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smcChromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1147 aa)    
Predicted Functional Partners:
KKW91232.1
Chromosome segregation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.939
KKW91231.1
Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 
 0.836
KKW90809.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.747
KKW93826.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.746
KKW89513.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.741
KKW92456.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.725
KKW91198.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.725
KKW92952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.720
KKW91279.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.720
KKW89590.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.720
Your Current Organism:
Sphingobium chungbukense
NCBI taxonomy Id: 56193
Other names: IMSNU 11152, JCM 11454, KCTC 2955, Pseudomonas sp. DJ77, S. chungbukense, Sphingobium chungbukense (Kim et al. 2000) Pal et al. 2005, Sphingomonas chungbukensis, Sphingomonas chungbukensis Kim et al. 2000, Sphingomonas sp. DJ77, strain DJ77
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