STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_10846Uncharacterized protein. (859 aa)    
Predicted Functional Partners:
A6R68_02461
Uncharacterized protein.
    
 0.981
PIGK
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.968
A6R68_20441
Uncharacterized protein.
    
 0.932
A6R68_16085
GOLD domain-containing protein; Belongs to the EMP24/GP25L family.
    
 
 0.895
A6R68_24067
GOLD domain-containing protein.
    
 
 0.895
A6R68_07843
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.888
A6R68_16772
Mannosyltransferase.
    
 0.872
A6R68_04060
Uncharacterized protein.
   
 0.849
A6R68_04264
Uncharacterized protein.
    
 0.844
A6R68_09786
ANK_REP_REGION domain-containing protein.
   
 0.843
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (18%) [HD]