STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_09891Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
A6R68_11814
Uncharacterized protein.
    
 0.822
A6R68_07910
THAP-type domain-containing protein.
    
 0.822
A6R68_04982
THAP-type domain-containing protein.
    
 0.822
A6R68_02577
Uncharacterized protein.
    
 0.822
A6R68_15262
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.822
A6R68_02339
Rhomboid domain-containing protein; Belongs to the peptidase S54 family.
    
 0.817
A6R68_10249
Uncharacterized protein.
    
  0.809
A6R68_09108
Uncharacterized protein.
    
  0.809
A6R68_08959
Uncharacterized protein.
    
  0.809
A6R68_08919
Uncharacterized protein.
    
  0.809
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.