STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_09652Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
A6R68_22852
SRP54 domain-containing protein.
  
 0.992
A6R68_02684
Uncharacterized protein.
   
 0.981
A6R68_04428
Plug_translocon domain-containing protein.
  
 0.979
A6R68_13453
Plug_translocon domain-containing protein.
  
 0.979
A6R68_19410
TPR_REGION domain-containing protein.
   
 0.976
A6R68_12036
Uncharacterized protein.
   
 0.955
A6R68_20857
Uncharacterized protein.
   
 
 0.940
A6R68_21231
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.927
A6R68_03091
Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
   
 0.924
A6R68_12283
Uncharacterized protein.
  
 
 0.918
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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