STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_09996Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
A6R68_12138
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.844
A6R68_10425
FERM domain-containing protein.
 
 
  0.815
A6R68_08080
C2-set_2 domain-containing protein.
    
 
 0.806
A6R68_10922
FERM domain-containing protein.
 
   
 0.804
A6R68_17560
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.795
A6R68_16622
4.1m domain-containing protein.
    
 
 0.775
A6R68_09762
Uncharacterized protein.
    
0.759
A6R68_20761
Uncharacterized protein.
   
 0.745
A6R68_04519
4.1m domain-containing protein.
    
 
 0.701
A6R68_06677
Uncharacterized protein.
   
 0.687
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.