STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_08482TGc domain-containing protein. (348 aa)    
Predicted Functional Partners:
A6R68_06030
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
     
 0.702
A6R68_15338
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.694
A6R68_11340
Fibrinogen C-terminal domain-containing protein.
    
 0.693
A6R68_06029
Uncharacterized protein.
    
  0.658
A6R68_06800
BTB domain-containing protein.
    
  0.643
A6R68_14872
Uncharacterized protein.
   
 
 0.643
A6R68_19147
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.643
A6R68_05978
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.629
A6R68_05415
Uncharacterized protein.
     
 0.625
A6R68_21642
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.625
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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