STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_08450Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
A6R68_20965
Uncharacterized protein.
  
 
  0.825
A6R68_13092
Beta_elim_lyase domain-containing protein.
   
 
  0.819
A6R68_01459
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.816
PISD
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
    
  0.811
A6R68_07176
Transket_pyr domain-containing protein.
     
 0.809
A6R68_07934
Pyr_redox domain-containing protein.
    
  0.803
A6R68_07933
Uncharacterized protein.
    
  0.803
A6R68_05405
Dihydrolipoyl dehydrogenase.
    
  0.803
A6R68_16925
Uncharacterized protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
  0.803
A6R68_19030
Uncharacterized protein.
  
 
  0.803
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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