STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_08071Ig-like domain-containing protein. (135 aa)    
Predicted Functional Partners:
A6R68_14867
Uncharacterized protein; Belongs to the MHC class I family.
  
 
  0.820
A6R68_11518
Ig-like domain-containing protein; Belongs to the MHC class II family.
    
  0.819
A6R68_05313
Ig-like domain-containing protein; Belongs to the MHC class II family.
    
  0.819
A6R68_16624
Protein kinase domain-containing protein.
    
  0.818
A6R68_16476
Protein kinase domain-containing protein.
    
  0.818
A6R68_07464
Uncharacterized protein; Belongs to the MHC class I family.
  
 
  0.817
A6R68_05978
Uncharacterized protein; Belongs to the peptidase S1 family.
    
  0.815
A6R68_21642
Uncharacterized protein; Belongs to the peptidase S1 family.
    
  0.815
A6R68_21641
Peptidase S1 domain-containing protein.
    
  0.815
A6R68_08762
Uncharacterized protein.
    
  0.810
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.