STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_07096Exonuclease domain-containing protein. (555 aa)    
Predicted Functional Partners:
A6R68_14096
Pan3_PK domain-containing protein.
    
 0.936
A6R68_00249
PCNA_C domain-containing protein.
  
 0.932
A6R68_12928
PCNA_C domain-containing protein.
  
 0.932
A6R68_22295
Uncharacterized protein.
  
 0.932
A6R68_14012
HRDC domain-containing protein.
  
 0.903
A6R68_08914
Uncharacterized protein.
  
 
 0.896
A6R68_20817
Exonuclease domain-containing protein.
  
 0.876
A6R68_23613
Exonuclease domain-containing protein.
  
 0.876
A6R68_19389
Uncharacterized protein.
  
 0.845
A6R68_10536
Uncharacterized protein.
  
 0.843
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.