STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_06709Uncharacterized protein. (335 aa)    
Predicted Functional Partners:
A6R68_21217
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 
 0.982
A6R68_08973
Uncharacterized protein.
    
 0.980
A6R68_19439
SGF29 C-terminal domain-containing protein.
    
 0.979
A6R68_18248
Uncharacterized protein.
    
 
 0.977
A6R68_19015
WD_REPEATS_REGION domain-containing protein.
    
 0.956
A6R68_10106
TAF domain-containing protein.
    
 0.953
A6R68_07097
Uncharacterized protein.
    
 0.951
A6R68_12518
Uncharacterized protein.
    
 0.951
A6R68_14275
Transcriptional adapter.
    
 0.947
A6R68_10008
TFIID_20kDa domain-containing protein.
    
 0.938
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.