STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_03574Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
A6R68_08705
Uncharacterized protein.
    
 0.712
A6R68_06692
Uncharacterized protein.
    
 0.653
A6R68_18599
Uncharacterized protein.
    
 0.653
A6R68_10020
Uncharacterized protein.
     
 0.651
A6R68_15753
Ig-like domain-containing protein.
  
  
  0.643
A6R68_07237
N-terminal Ras-GEF domain-containing protein.
   
 
  0.624
A6R68_17234
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
     
 0.618
A6R68_07908
Uncharacterized protein.
     
 0.573
A6R68_08866
Fibroblast growth factor receptor.
     
 0.554
A6R68_07585
Protein kinase domain-containing protein.
     
 0.554
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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