STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_03555Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
A6R68_03227
CBAH domain-containing protein; Belongs to the acid ceramidase family.
     
 0.921
A6R68_12351
Sulfatase domain-containing protein.
     
 0.916
A6R68_21160
Uncharacterized protein.
    
  0.908
A6R68_15589
Alpha-galactosidase.
     
 0.900
A6R68_22896
Glucosylceramidase.
     
 0.899
A6R68_21213
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.884
A6R68_22538
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
 0.881
A6R68_11799
Uncharacterized protein.
     
 0.880
A6R68_09241
Uncharacterized protein.
    
 
 0.873
A6R68_14260
Uncharacterized protein.
    
 
 0.873
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.