STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_03920Uncharacterized protein. (1338 aa)    
Predicted Functional Partners:
A6R68_08671
Uncharacterized protein.
 
 
 0.971
A6R68_03951
Uncharacterized protein.
 
     0.951
A6R68_03921
Uncharacterized protein.
 
     0.946
A6R68_03922
Uncharacterized protein.
 
     0.946
A6R68_03948
DHC_N1 domain-containing protein.
 
     0.940
A6R68_13882
DHC_N2 domain-containing protein.
 
 
 0.939
A6R68_11546
Uncharacterized protein.
 
   
  0.927
A6R68_12037
Uncharacterized protein.
 
   
  0.919
A6R68_01781
AAA_6 domain-containing protein.
 
  
  0.914
A6R68_12263
DHC_N2 domain-containing protein.
 
   
  0.902
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.