STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_01598t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (300 aa)    
Predicted Functional Partners:
A6R68_00274
C2 domain-containing protein.
     
 0.983
A6R68_20520
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.946
A6R68_20558
V-SNARE coiled-coil homology domain-containing protein.
    
 0.933
A6R68_19127
Longin domain-containing protein; Belongs to the synaptobrevin family.
    
 0.923
A6R68_02207
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.919
A6R68_10299
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.915
A6R68_08466
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.915
A6R68_20562
V-SNARE coiled-coil homology domain-containing protein.
    
 0.915
A6R68_06156
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.910
A6R68_14488
V-SNARE coiled-coil homology domain-containing protein.
    
 0.899
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.