STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_01103TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (207 aa)    
Predicted Functional Partners:
A6R68_15223
Uncharacterized protein.
    
 0.958
A6R68_21708
Uncharacterized protein.
   
 0.857
A6R68_11563
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
 0.787
A6R68_08730
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
 
 0.774
A6R68_05781
Uncharacterized protein.
    
 0.762
A6R68_02378
TNF receptor-associated factor.
    
 0.753
A6R68_02624
BaffR-Tall_bind domain-containing protein.
     
 0.725
A6R68_02509
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.723
A6R68_02676
CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.
     
 0.707
A6R68_12846
MATH domain-containing protein.
    
 0.705
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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