STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_00394Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
A6R68_13219
RAWUL domain-containing protein.
    
 0.992
A6R68_07477
RING-type domain-containing protein.
    
 0.984
A6R68_01961
RING-type domain-containing protein.
    
 0.975
A6R68_12936
E2F_TDP domain-containing protein.
   
 0.966
A6R68_02630
FCS-type domain-containing protein.
    
 0.964
A6R68_10904
RING-type domain-containing protein.
    
 0.957
A6R68_09978
RING-type domain-containing protein.
    
 0.957
A6R68_16593
RAWUL domain-containing protein.
    
 0.956
A6R68_00275
RAWUL domain-containing protein.
    
 0.954
A6R68_10176
Uncharacterized protein.
    
 0.933
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.