STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_13740Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
A6R68_23193
Aminotran_5 domain-containing protein.
     
 0.821
A6R68_20618
Uncharacterized protein.
    
 0.815
A6R68_20965
Uncharacterized protein.
   
 
  0.803
A6R68_16433
Pribosyltran domain-containing protein.
    
  0.798
A6R68_09786
ANK_REP_REGION domain-containing protein.
   
 0.790
A6R68_19097
Purple acid phosphatase.
  
 
 0.769
A6R68_11088
SHMT domain-containing protein.
    
  0.768
A6R68_10660
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
  0.768
A6R68_04049
SHMT domain-containing protein.
    
  0.768
A6R68_13846
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
  0.768
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.