STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_13208CARD domain-containing protein. (201 aa)    
Predicted Functional Partners:
A6R68_23245
Uncharacterized protein.
   
 0.981
A6R68_04758
MARVEL domain-containing protein.
   
 0.970
A6R68_18396
Myosin_tail_1 domain-containing protein.
   
 0.960
A6R68_00777
Uncharacterized protein; Belongs to the MAGUK family.
 
  
 0.956
A6R68_11637
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
   
 0.931
A6R68_00261
Uncharacterized protein.
   
 0.931
A6R68_13544
Ras-associating domain-containing protein.
   
 0.927
A6R68_22042
Uncharacterized protein.
   
 0.927
A6R68_17957
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 0.913
A6R68_07316
Uncharacterized protein.
   
 0.911
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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