STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_12847Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
A6R68_00593
Glyco_transf_7N domain-containing protein.
   
 
 0.848
A6R68_13406
Uncharacterized protein.
   
 
 0.844
A6R68_23258
Uncharacterized protein.
   
 
 0.844
A6R68_15612
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.843
A6R68_20426
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.843
A6R68_04502
Glyco_transf_7C domain-containing protein.
   
 
 0.840
A6R68_02107
Glyco_transf_7N domain-containing protein.
   
 
 0.840
A6R68_10649
Glyco_trans_2-like domain-containing protein.
     
 0.839
A6R68_03861
Uncharacterized protein.
   
 
 0.830
A6R68_14071
Glyco_transf_7N domain-containing protein.
   
 
 0.830
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.