STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_15566Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
A6R68_14015
HORMA domain-containing protein.
    
 
 0.976
A6R68_15256
Uncharacterized protein.
    
 
 0.695
A6R68_14541
Uncharacterized protein.
      
 0.569
A6R68_02484
Uncharacterized protein.
      
 0.564
A6R68_09477
POLAc domain-containing protein.
      
 0.552
A6R68_18848
53-BP1_Tudor domain-containing protein.
    
 
 0.547
A6R68_03938
Uncharacterized protein.
      
 0.523
A6R68_23973
Uncharacterized protein.
    
 
 0.479
A6R68_21304
MPN domain-containing protein.
      
 0.470
A6R68_20428
RING-type domain-containing protein.
      
 0.459
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.