STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_15139MAGE domain-containing protein. (343 aa)    
Predicted Functional Partners:
A6R68_23480
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.891
A6R68_15502
Uncharacterized protein.
   
 0.882
A6R68_23987
AAA_23 domain-containing protein.
   
 0.880
A6R68_06715
SP-RING-type domain-containing protein.
    
 0.877
A6R68_13163
Uncharacterized protein.
   
 0.855
A6R68_13168
AAA_23 domain-containing protein.
   
 0.855
A6R68_16129
Uncharacterized protein.
    
 0.811
A6R68_12767
SMC hinge domain-containing protein.
    
 0.804
A6R68_08211
SMC hinge domain-containing protein.
   
 0.750
A6R68_17870
SMC_N domain-containing protein.
   
 0.750
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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