STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_14752Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
A6R68_16812
TEA domain-containing protein.
    
 
 0.973
A6R68_18765
YBD domain-containing protein.
    
 
 0.900
A6R68_14722
IRF-2BP1_2 domain-containing protein.
    
 
 0.860
A6R68_22266
Transcriptional enhancer factor TEF-5; Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis.
    
 
 0.847
A6R68_14995
TEA domain-containing protein.
    
 
 0.841
A6R68_22173
YBD domain-containing protein.
    
 
 0.841
A6R68_07246
Uncharacterized protein.
    
 
 0.785
A6R68_07249
Uncharacterized protein.
    
 
 0.785
A6R68_06946
WW domain-containing protein.
    
 
 0.785
A6R68_07247
Uncharacterized protein.
    
 
 0.785
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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