STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_14730Helicase ATP-binding domain-containing protein. (306 aa)    
Predicted Functional Partners:
A6R68_01759
Poly [ADP-ribose] polymerase.
   
 0.927
A6R68_19005
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
   
 0.927
A6R68_16708
Uncharacterized protein.
    
 0.902
A6R68_19776
SANT domain-containing protein.
 
      0.899
A6R68_18617
SANT domain-containing protein.
 
      0.899
A6R68_19060
Uncharacterized protein.
    
  0.896
A6R68_19059
Uncharacterized protein.
    
  0.896
A6R68_09129
PARP alpha-helical domain-containing protein.
   
 0.888
A6R68_11079
Uncharacterized protein.
    
 0.878
A6R68_24148
Histone H2A; Belongs to the histone H2A family.
    
 0.878
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.