STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_17041RING-type domain-containing protein. (197 aa)    
Predicted Functional Partners:
A6R68_10638
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.826
A6R68_06243
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.826
A6R68_23455
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.826
A6R68_23100
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.826
A6R68_21600
Ribosomal_S27 domain-containing protein.
    
 0.825
A6R68_02864
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.822
A6R68_22431
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.808
A6R68_10989
Peptidase_S8 domain-containing protein.
    
  0.807
A6R68_10184
Proho_convert domain-containing protein.
    
  0.807
A6R68_10305
Peptidase_S8 domain-containing protein.
    
  0.807
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.