STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_16246CPT_N domain-containing protein. (128 aa)    
Predicted Functional Partners:
A6R68_04562
Uncharacterized protein.
     
 0.891
A6R68_16685
AMP-binding domain-containing protein.
   
 
 0.887
A6R68_00086
Uncharacterized protein.
     
 0.886
A6R68_23175
AMP-binding domain-containing protein.
   
 
 0.876
A6R68_15383
Uncharacterized protein.
     
 0.869
A6R68_23039
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
 
 
 
 0.839
A6R68_16247
Uncharacterized protein.
 
      0.826
A6R68_18961
AMP-binding domain-containing protein.
     
 0.822
A6R68_12347
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
     
0.821
A6R68_05122
Uncharacterized protein.
     
 0.798
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.