STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_16135Homeobox domain-containing protein. (358 aa)    
Predicted Functional Partners:
A6R68_16105
Homeobox domain-containing protein.
   
 
0.912
A6R68_11126
Uncharacterized protein.
   
 
0.823
A6R68_10484
Homeobox domain-containing protein.
    
 0.736
A6R68_08770
Homeobox domain-containing protein.
    
 0.736
A6R68_08144
PBC domain-containing protein.
    
 0.736
A6R68_05071
PBC domain-containing protein.
    
 0.736
A6R68_17174
Uncharacterized protein.
    
 0.736
A6R68_17154
Homeobox domain-containing protein.
    
 0.736
A6R68_16117
Homeobox domain-containing protein.
   
 
0.728
A6R68_16126
Homeobox domain-containing protein.
   
 
0.711
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.