STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_19644Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (482 aa)    
Predicted Functional Partners:
A6R68_16098
Uncharacterized protein.
  
0.940
A6R68_19762
Uncharacterized protein.
  
 0.938
A6R68_09019
Acetyl-coenzyme A synthetase.
  
 0.936
A6R68_06097
Uncharacterized protein.
  
 0.936
A6R68_01158
AA_kinase domain-containing protein.
  
 
 0.934
A6R68_00412
Citrate synthase; Belongs to the citrate synthase family.
  
 0.929
A6R68_11858
AMP-binding_C domain-containing protein.
  
 0.928
A6R68_17984
AMP-binding domain-containing protein.
  
 0.928
A6R68_15040
Uncharacterized protein.
 
 0.926
SUCLG1
Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.
  
 
 0.924
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.