STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_21982CAF1C_H4-bd domain-containing protein. (179 aa)    
Predicted Functional Partners:
A6R68_19008
DIRP domain-containing protein.
    
 0.971
A6R68_12657
Uncharacterized protein.
    
 0.969
A6R68_23235
Hat1_N domain-containing protein.
   
 0.964
A6R68_01535
WD_REPEATS_REGION domain-containing protein.
    
 0.963
A6R68_18541
CRC domain-containing protein.
   
 0.962
A6R68_16065
Uncharacterized protein.
   
 0.957
A6R68_09450
Uncharacterized protein.
   
 0.948
A6R68_23376
RBB1NT domain-containing protein.
   
 0.948
A6R68_23379
Uncharacterized protein.
   
 0.948
A6R68_23375
ARID domain-containing protein.
   
 0.948
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.